If you machine the flywheel you will not be able to use the standard ecu again at any time...
Its really very simple how the trigger works..
The flywheel is 66 teeth in total, and has 3 identical sequences in a row, of in theory '22' teeth to make a sequence, but in reality two of the teeth have the space between them filled in, and two are 'missing', but they are still counted.. like this...
Now, if the flywheel would have 66 teeth, that makes each position of the teeth 5.45 degrees apart (360/66)
Now the settings in the ecu are told to look for 20 teeth, and then a missing gap of a tooth and a gap, which you can see on the diagram above. The reason for telling the ecu to look at a 108(therabouts) degree total sequence, it because that is what the 20 teeth x 5.45 degrees look for. It does not matter that the last teeth are filled in, its trigger still happens at the correct angle. If you machined the gap or not, it would make no difference, I have told the ecu that every tooth is 5.45 degrees apart..
So basically, all you are telling the ecu to do is to look for this sequence, pump fuel, ignite it, and repeat the sequence. This setup will only work on a distributor/batched injection vehicle such as the GTA, as the ecu has no reference if it has to fire at TDC or BDC, as its a continuous sequence anyway and makes no difference...
All Renault flywheels have this system, and there is in fact no reason why a 4 cylinder Clio ecu wouldnt work on a GTA. The reason is, on the Clio, they have the same 22 teeth sequence, but only twice on the flywheel, so it does the fuel/spark every sequence. All the Renault ecus just look for 22 teeth and repeat, so if you stuck it on a GTA in theory it would do the same, just times 3 per revolution. If Renault made an 8 cylinder, you can bet it would have 88 teeth on the flywheel, and the same ecu architechture.
I know the Adaptronic works on a R5 now, as I had one running last week using the same settings (but with the angles degrees changes per tooth as there is only 44 teeth on the flywheel)